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PUBLICATIONS

Research Papers - 42 (International - 41; National - 01)

 

1.  Pradeep N., Munikumar M., Sandeep S., Hema K., Sudheer Kumar K. and Umamaheswari A. (2015) Combination of e-pharmacophore modeling, multiple docking strategies and molecular dynamic simulations to discover of novel antagonists of BACE1. Journal of Biomolecular Structure and Dynamics; 33 (supplement 1): 129-130. 

2.  Hema K., Vani Priyadarshini I., Sandeep S., Pradeep N., Chiranjeevi P. and Umamaheswari A. (2015) Subunit vaccine design against pathogens causing atherosclerosis. Journal of Biomolecular Structure and Dynamics; 33 (supplement 1): 135-136.

3.  Sandeep S., Pradhan D., Pradeep N., Hema K., Siva Krishna V. and Umamaheswari A. (2015) Structure guided novel lead molecules against ERK proteins: application of multiple docking and molecular dynamics studies. Journal of Biomolecular Structure and Dynamics; 33 (supplement 1): 134-135. 

4.  Pradhan D., Priyadarshini V., Shweta A., Pradeep N., Arnab N., Arunkumar J. and Umamaheswari A. (2015) Discovery of potential inhibitors of BMX non-receptor tyrosine kinase through e-pharmacophore based virtual screening. Journal of Biomolecular Structure and Dynamics; 33 (supplement 1): 118-120. 

5.  Hema K., Priyadarshini V., Pradhan D., Munikumar M., Sandeep S., Pradeep N., Suchitra MM., and Umamaheswari A. (2015) Identification of Putative Drug Targets and Vaccine Candidates for Pathogens Causing Atherosclerosis. Biochemistry & Analytical Biochemistry; 4(2): 1-9. 

6. Lakshmi Vara Prasad M., Munikumar M., Sudheer Kumar K., Umamaheswari A. (2015) Identification of Novel Inhibitors for Inositol Mono-phosphatase of Staphylococcus aureus through Virtual Screening. International Journal of Scientific and Engineering Research; 6(2): 177-181. 

7. Sivakumari N., Chiranjeevi P., Pradhan D., Umamaheswari A. (2015) Discovery of Potent Inhibitors against GTP Pyrophosphokinase of Neisseria meningitidis Serogroup B. International Journal of Scientific and Engineering Research; 6(2): 273-278. 

8. Narasimhulu N., Priyadrshini I.V., Sandeep S., Umamaheswari A. (2015) Identification of Novel Inhibitor Molecules for Choloylglycine Hydrolase of Enterococcus faecalis. International Journal of Scientific and Engineering Research; 6(2): 192-199. 

9. Parveen S., Pradeep N., Hema K., Umamaheswari A. (2015) Prediction of Novel Inhibitors against Exodeoxyribonuclease І of H. influenzae through In Silico Approach. International Journal of Scientific and Engineering Research; 6(2): 217-221. 

10. Monika K., Umamaheswari A., Megharaj M., Venkateswarlu K. (2015) In silico approach to support that p-nitrophenol monooxygenase from Arthrobacter sp. strain JS443 catalyzes the initial two sequential monooxygenations. Interdisciplinary Sciences: Computational Life Sciences; 7: 1-12. DOI: 10.1007/s12539-013-0216-3. 

11. Pradeep N., Sandeep S., Hema K., Umamaheswari A. (2014) E-Pharmacophore based virtual screening to identify lead molecules for GSK-3β induced Alzheimer’s disease. J ClinSci Res.; 3 (Suppl 1):S33.

12. Munikumar M., Priyadarshini V., Pradhan D., Umamaheswari A. (2014) Identification of potent inhibitors for RuvA through different docking strategies. J ClinSci Res.; 3 (Suppl 1):S36.

13. Chiranjeevi P., Swargam S., Pradhan D., Umamaheswari A. (2014) In silico design of novel leads against p55 protein domain of VacA toxin. J ClinSci Res; 3 (Suppl 1):S45.

14. AnjumMobeen S, Munikumar M, Umamaheswari A. (2014) Docking studies to explore novel inhibitors against human beta-site APP cleaving S41 enzyme (BACE-1) involved in Alzheimer’s disease. J ClinSci Res; 3 (Suppl 1):S41.

15. Praveen K., Hemanth Kumar M., Umamaheshwari A., Reddy D.M., Sudhakar P., Munikumar M., Pradhan D., Sabita N. (2014) A Sugarcane Germplasm Database. Sugar Tech.; 17(2): 150-155. DOI: 10.1007/s12355-014-0307-4. 

16. Rajitha G., Prasad K.V.S.R.G., Umamaheswari A., Pradhan D and Bharathi K. (2014) Synthesis, biological evaluation and molecular docking studies of N-(α-acetamidocinnamoyl) aryl hydrazone derivatives as antiinflammatory and analgesic agents. Journal of Medicinal Chemistry Research; 23: 5204-5214. DOI: 10.1007/s00044-014-1091-0. 

17. Priyadarshini I.V., Pradhan D., Munikumar M., Swargam S., Umamaheswari A* and Rajasekhar D. (2014) Genome-based approaches to develop epitope-driven subunit vaccines against pathogens of infective endocarditis. Journal of Biomolecular Structure and Dynamics; 32(6): 876-889. DOI:10.1080/07391102.2013.79587. 

18. Pradhan D., Priyadarshini I.V., Munikumar M., Swargam S., Umamaheswari A* and Aparna B (2014). Para-(benzoyl)-phenylalanine as a potential inhibitor against LpxC of Leptospira spp.: Homology modeling, docking and molecular dynamics study. Journal of Biomolecular Structure and Dynamics; 32(2): 171-185. 

19. Mobeen A., Priyadarshini I.V., Pradhan D., Munikumar M., Swargam S. and Umamaheswari A. (2013) Identification of potent inhibitors for β-secretase through structure based virtual screening and molecular dynamics simulations. Journal of Clinical and Scientific Research; 14(1): 32-50. 

20.Priyadarshini I.V., Pradhan D., Munikumar M., Swargam S. Umamaheswari A. and Rajasekhar D (2013) Molecular modeling, docking and dynamics studies of biotin carboxyl carrier protein of acetyl-CoA carboxylase to discover potential inhibitors. Journal of Clinical and Scientific Research; 2(2): 72-80. 

21. Priyadarshini I.V., Pradhan D., Munikumar M., Swargam S. and Umamaheswari A. (2013) Structure-based virtual screening towards identification of potential FabH inhibitors. Journal of Biomolecular Structure and Dynamics; 31: sup1, 113-114. 

22. Pradhan D., Priyadarshini I.V., Munikumar M., Swargam S. and Umamaheswari A. (2013) Discovery of potent KdsA inhibitors of Leptospirainterrogans through homology modeling, docking, and molecular dynamics simulations. Journal of Biomolecular Structure and Dynamics; 31: sup1, 105. 

23. Munikumar M., Priyadarshini I.V., Pradhan D., Swargam S. and Umamaheswari A. (2013) T-cell vaccine design for Streptococcus pneumoniae: an in silico approach. Journal of Biomolecular Structure and Dynamics; 31: sup1, 114-115. 

24. Priyadarshini I.V., Pradhan D., Munikumar M., Swargam S., Umamaheswari A and Rajasekhar D. (2013) In Silico drug targets for infectious endocarditis. Online Journal of Bioinformatics; 14(1):32-50.

25. Munikumar M., PriyadarshiniI.V.,Pradhan D., Umamaheswari A. and Vengamma B (2013) Computational approaches to identify common subunit vaccine candidates against bacterial meningitis. Interdisciplinary Sciences: Computational Life Sciences; 5(2):155-164. 

26. Munikumar M., Priyadarshini I.V., Pradhan D., Swargam S., Umamaheswari A and Vengamma B (2012) In Silico Identification of common putative drug targets among the pathogens of bacterial meningitis. Biochemistry and Analytical Bioichemistry (OMICS Publishing Group) 1:8.

27. Navya P., Hema K., Munikumar M., Swargam S and Umamaheswari A. (2012) Molecular docking of a beta-2-microglobulin drug target. Online Journal of Bioinformatics;13(1):93-201. 

28. Hemanthkumar M. and Umamaheswari A. (2012) Homology model of sugarcane soluble acid invertase. Online Journal of Bioinformatics; 13(1):93-201. 

29. Sandeep S.,Priyadarshini I.V., Pradhan D., Munikumar M. and Umamaheswari A.(2012) Docking and molecular dynamics simulations studies of human protein kinase catalytic subunit alpha with antagonist .Journal of Clinical and Scientific Research; 1(1):15-23. 

30. Priyadarshini I.V., Pradhan D., Munikumar M., Umamaheswari A., Rajasekhar D and Srinivasa Rao PVLN (2011) Docking and molecular dynamic simulations of Legionella pneumophilaMurB reductase for potential inhibitor design. Biochemistry and Analytical Bioichemistry (OMICS Publishing Group). 1:101. doi:10.4172/2161-1009.1000101.

31. Umamaheswari A., Pradhan D., Priyadarshini I.V., Munikumar M. and Srinivasa Rao PVLN (2011) Computational analysis of K-Hefutoxin interaction with Kv channels and L-carnitine molecule for scorpion envenomation. Online Journal of Bioinformatics; 12(2): 304-322. 

32. Umamaheswari A., Pradhan D. and Hemanthkumar M. (2011) Computer aided subunit vaccine design against pathogenic Leptospiraserovars. Interdisciplinary Sciences: Computational Life Sciences; 4(1):38-45. 

33. Priyadarshini I.V., Pradhan D., Munikumar M and Umamaheswari A. (2011) Homology Modeling and Active Site Analysis of MurB Reductase: A Potential Drug Target of Legionella pneumophila. Online Journal of Bioinformatics; 12(2):217-229. 

34. Vijayasree P., Pradhan D and Umamaheswari A.(2011) Virtual human MEK1 protein inhibitors catechin and gw8510. Online Journal of Bioinformatics; 12(1):98-106.

35. Umamaheswari A., Munikumar M, Pradhan D. and Hemanthkumar M. (2011) Docking studies towards exploring lead molecules against binding pocket of yellow fever virus envelope protein. Interdisciplinary Sciences: Computational Life Sciences; 3(1):64-77. 

36. Umamaheswari A., Pradhan D. and Hemanthkumar M. (2010) Identification of potential Leptospiraphosphoheptose isomerase inhibitors through virtual high-throughput screening. Genomics, Proteomics & Bioinformatics; 8(4):246-255. 

37. Praneetha A, Pradhan D, Priyadarshini I.V, Munikumar M. and Umamaheswari A (2010) Analysis of binding properties of VP2 protein of Human Parvovirus B19 through in Silico Molecular Docking. Indian J. Virol. 21(Sup1.), A32. 

38. Umamaheswari A., Pradhan D. and Hemanthkumar M. (2010) In silico identification of common putative drug targets in Leptospirainterrogans. Journal of Chemical Biology; 3(4):165-173. 

39. Umamaheswari A., Pradhan D. and Hemanthkumar M. (2010) Virtual screening for potential inhibitors of homology modeled LeptospirainterrogansMurD ligase. Journal of Chemical Biology; 3(4):175-187.

40.Rakesh S., Pradhan D. and Umamaheswari A. (2009) In silico approach for future development of subunit vaccines against Leptospirainterrogansserovar Lai. International Journal of Bioinformatics Research; 1(2):85-92.

41. Umamaheswari A., Pradhan D., Priyadrshini I. V. and Subramanyam G., (2008) In silico Putative Drug targets in Leptospirainterrogans and Homology Modeling of UDP-N-acetylglucosamine 1-carboxyvinyltransferase Mur A. Genomic Medicine; 2:295.

42. Priyadrshini I V., Pradhan D., Umamaheswari A. and Subramanyam G., (2008) "Homology modeling of 50s ribosomal protein L10: Putative common drug target among organisms causing infective endocarditis" Proceedings of National Workshop on "Recent trends in Biomedical Physics" T.J.P.S., Guntur, A.P.

 Accepted for publication:

 

1.   Pradeep N, Vani P, Dibyabhaba P, Munikumar M, Sandeep S, Hema K, Vengamma B, Umamaheswari A. E-pharmacophore-based virtual screening to identify GSK-3β inhibitors. Journal of Receptor Signaling and Transduction 2015 (IRST_A_1122043).

2.   Pradeep N, Munikumar M, Sandeep S, Hema K, Vengamma B, Umamaheswari A. E-Pharmacophore Based Virtual Screening to Identify Agonist for PKA-Cα. Biochemistry and Analytical Biochemistry 2015.

 

Paper Presentations / Publications in Conferences / workshops attended 118

International 50; National Conferences 68

 

 

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